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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015803654.1_cds_XP_016485256.1_7596
CDS Infomation

[gene=LOC107805694] [db_xref=GeneID:107805694] [protein=phosphoenolpyruvate carboxykinase [ATP]-like] [protein_id=XP_016485256.1] [location=join(23863..24125,24696..24880,25167..25320,25440..25524,26346..26446,26664..26962,27104..27277,27359..27424,27525..27703,27794..27963,28047..28215,28309..28452)] [gbkey=CDS]
Sequence

ATGGCATCAAACGGAAATGGAGAATTTAGTTTCGACAGTAAAAGGAGAAGTGGGCTGCCG
AAGATCCAGACACAGAAGACAGACGATGACAACGTGGTTTGCCACGACGACAGTGCTACG
CCGGTGAAAGCGCAGACATTGGACGAGTTGCATTCTCTTCAGAAAAAGAAATCAGCGCCC
ACTACTCCCATTAAGTCCCCCCATGTCTTTGGCGTTGCCGTTTCTGAAGAAGAACGCCAG
AAACAACAGCTCCAATCCATTAGTGCGTCATTGGCATCATTGACACGAGAGACTGGTCCA
AAGGTGGTGAAAGGAGACCCGGCAAGGCAAGCGGAAACGCCGAAGGTGGCACAGTCACAT
GCAACTCACTACCACCACGCGCCTACCCTTAACATTAGTGACAGTGCCCTCAAGTTCACT
CACATTCTCTACAATCTCTCTCCTGCTGAGCTGTATGAGCAAGCAATCAAGTATGAGAAG
GGGTCATTTATCACGTCGAGTGGTGCATTGGCCACACTTTCGGGAGCCAAAACGGGCCGT
TCCCCTAGAGACAAGCGTGTTGTTAGAGACGAAACCACTGAGAAAGACCTTTGGTGGGGA
AAGGGCTCACCCAATATCGAAATGGACGAGCAGACTTTCTTAATCAACAGAGAAAGAGCT
GTTGATTACCTGTGCTCATTGGAGAAGGTGTACGTGAATGATCAGTTCCTCAACTGGGAT
CCAAACAATCGTATCAAAGTTAGAATTGTATCTGCCAGAGCCTATCACTCCTTGTTCATG
CACAACATGTGTATCCGACCCACTGCTGAAGAGCTGGAGGAATTTGGTACTCCGGACTTC
ACAATATACAATGCTGGTCAATTCCCATGTAACCGTTACACCCACTATATGACTTCCTCC
ACTAGCATAGACGTCAATCTTGCTAGGAAGGAAATGGTCATCCTTGGCACACAGTATGCT
GGGGAAATGAAGAAAGGCCTTTTCAGCCTAATGCACTATCTAATGCCTATGCGCCAAATC
CTCTCTCTACACTCTGGCTGCAATATGGGAAAAGAAGGAGATGTTGCCCTCTTCTTTGGT
TTATCAGGAACTGGGAAGACAACACTGTCTACTGACCACAATCGATACCTGATTGGAGAT
GACGAACACTGCTGGAGTGGTCATGGTGTCTCAAACATCGAGGGAGGTTGCTATGCCAAA
TGCATAGACCTTTCAAGGGAGAAGGAGCCTGATATCTGGAATGCCATCAAGTTTGGCACT
GTGCTGGAAAATGTAGTTTTCGAAGAACATACTCGAGAAGTGGATTATGCAGACAAATCT
GTAACAGAGAACACCAGGGCAGCATATCCAATTGAATACATTCCAAATGCTAAAATACCA
TGTGTTGGTCCTCATCCGAAGAACGTCATTCTTCTAGCATGTGATGCATTTGGCGTGCTC
CCGCCAGTCAGCAAATTGAACTTGGCGCAGACAATGTACCACTTTATCAGTGGCTACACA
GCTTTGGTGGCAGGAACCGAGGATGGTATTAAGGAGCCTACAGCAACATTTTCAGCATGT
TTTGGTGCAGCATTTATTATGCTTCATCCAACAAAATATGCAGCTATGTTGGCTGAGAAA
ATGAAGAAACATGGAGCTACAGGATGGCTTGTGAACACCGGCTGGTCAGGTGGAAGCTAT
GGATCAGGTCGCCGTATTAAGTTAGCATACACAAGGAAGATCATCGATGCTATCCACTCC
GGAGCCCTTTTGAATGCAAATTACAAGAAGACAGAGGTATTTGGACTGGAGATTCCAACT
GAACTCGAGGGTGTACCTTCCGAGATTCTTGATCCTATGAACACTTGGCCTGACAAGAAG
GCTCACAAGGATACCCTGTTGAAGCTGGGAGGTCTCTTTAGGAAGAATTTTGAGGTATTC
ACAAACTACAAGATCGGAACTGATAACAACCTGACTGAGGAAATCCTGGCCGCTGGTCCA
AATTTCTAA

Peptide Sequence

PEP ID

XP_016485256.1
PEP Infomation

PREDICTED: phosphoenolpyruvate carboxykinase [ATP]-like [Nicotiana tabacum]
Sequence

MASNGNGEFSFDSKRRSGLPKIQTQKTDDDNVVCHDDSATPVKAQTLDELHSLQKKKSAP
TTPIKSPHVFGVAVSEEERQKQQLQSISASLASLTRETGPKVVKGDPARQAETPKVAQSH
ATHYHHAPTLNISDSALKFTHILYNLSPAELYEQAIKYEKGSFITSSGALATLSGAKTGR
SPRDKRVVRDETTEKDLWWGKGSPNIEMDEQTFLINRERAVDYLCSLEKVYVNDQFLNWD
PNNRIKVRIVSARAYHSLFMHNMCIRPTAEELEEFGTPDFTIYNAGQFPCNRYTHYMTSS
TSIDVNLARKEMVILGTQYAGEMKKGLFSLMHYLMPMRQILSLHSGCNMGKEGDVALFFG
LSGTGKTTLSTDHNRYLIGDDEHCWSGHGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGT
VLENVVFEEHTREVDYADKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVL
PPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEK
MKKHGATGWLVNTGWSGGSYGSGRRIKLAYTRKIIDAIHSGALLNANYKKTEVFGLEIPT
ELEGVPSEILDPMNTWPDKKAHKDTLLKLGGLFRKNFEVFTNYKIGTDNNLTEEILAAGP
NF

Transcript Sequence

Gene sequence data has not been registered.